Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas fragariae |
| Strain | strain PD5205 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Fragaria x ananassa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799566 bp
Thymine Count
796260 bp
Guanine Count
1318411 bp
Cytosine Count
1318407 bp
Genome Length
4232644 bp
Protein-coding Genes
3796 genes
Non-Coding Genes
192 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | PD5205_RS10155 | Not Available | Negative | 2156716 - 2158551 | 67973.1 |
| type vi secretion system baseplate subunit tsse | PD5205_RS10160 | Not Available | Negative | 2158554 - 2159042 | 18063.6 |
| hcp family type vi secretion system effector | PD5205_RS10165 | Not Available | Negative | 2159190 - 2159687 | 18068.3 |
| type vi secretion system contractile sheath large subunit | PD5205_RS10170 | Not Available | Negative | 2159822 - 2161318 | 55407.5 |
| type vi secretion system contractile sheath small subunit | PD5205_RS10175 | Not Available | Negative | 2161322 - 2161822 | 18906.8 |
| tetratricopeptide repeat protein | PD5205_RS10180 | Not Available | Negative | 2161868 - 2162482 | 21782.0 |
| type vi secretion system lipoprotein tssj | PD5205_RS10185 | Not Available | Positive | 2162741 - 2163349 | 21223.7 |
| type vi secretion system baseplate subunit tssk | PD5205_RS10190 | Not Available | Positive | 2163498 - 2164832 | 49488.1 |
| type ivb secretion system protein icmh/dotu | PD5205_RS10195 | Not Available | Positive | 2164829 - 2165620 | 29257.6 |
| type vi secretion system vgr family protein | PD5205_RS10200 | Not Available | Positive | 2165631 - 2168444 | 99065.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
