Allosphingosinicella indica strain Dd16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomicrobiaceae

Genus

Allosphingosinicella

Description

Allosphingosinicella indica strain Dd16 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. This strain is cataloged under the accession number NZ_LT840185.1, which provides a reference for its genomic data and facilitates further research into its genetic characteristics. As a member of the Allosphingosinicella genus, strain Dd16 is likely to exhibit unique metabolic capabilities, particularly in the degradation of complex organic compounds. This feature may be significant for ecological applications, such as bioremediation, where microbial degradation of pollutants is crucial. The single replicon structure may enhance its metabolic efficiency, allowing it to thrive in diverse ecological niches. In summary, Allosphingosinicella indica strain Dd16, with its single replicon and specific genetic accession, presents a promising subject for further study in microbiology and ecology. Its potential for effective degradation of organic materials underscores the importance of such microorganisms in environmental management and sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomicrobiaceae
GenusAllosphingosinicella
SpeciesAllosphingosinicella indica
Strainstrain Dd16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosphingosinicella indica strain Dd16 chromosome I.

Gene Summary

Adenine Count

462501 bp

Thymine Count

463172 bp

Guanine Count

936667 bp

Cytosine Count

944913 bp

Genome Length

2807353 bp

Protein-coding Genes

2746 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
m28 family metallopeptidaseB9N75_RS01310Not AvailablePositive267878 - 26954559645.6
agmatine deiminase family proteinB9N75_RS01315Not AvailablePositive269542 - 27052234275.4
n-carbamoylputrescine amidaseB9N75_RS01320Not AvailablePositive270624 - 27147231023.8
hypothetical proteinB9N75_RS13855Not AvailableNegative271469 - 2716395944.64
uracil-dna glycosylaseB9N75_RS01325Not AvailableNegative271636 - 27230123998.8
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinaseB9N75_RS01330Not AvailablePositive272326 - 27283518463.7
Trna-lysNot AvailableNot AvailablePositive272826 - 272901Not Available
duf411 domain-containing proteinB9N75_RS01340Not AvailablePositive272925 - 27335915145.8
phosphatase pap2 family proteinB9N75_RS01345Not AvailablePositive273475 - 27417625405.3
duf938 domain-containing proteinB9N75_RS01350Not AvailableNegative274167 - 27477521608.7

Displaying genes 291 – 300 of 2816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.