Allosphingosinicella indica strain Dd16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomicrobiaceae

Genus

Allosphingosinicella

Description

Allosphingosinicella indica strain Dd16 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. This strain is cataloged under the accession number NZ_LT840185.1, which provides a reference for its genomic data and facilitates further research into its genetic characteristics. As a member of the Allosphingosinicella genus, strain Dd16 is likely to exhibit unique metabolic capabilities, particularly in the degradation of complex organic compounds. This feature may be significant for ecological applications, such as bioremediation, where microbial degradation of pollutants is crucial. The single replicon structure may enhance its metabolic efficiency, allowing it to thrive in diverse ecological niches. In summary, Allosphingosinicella indica strain Dd16, with its single replicon and specific genetic accession, presents a promising subject for further study in microbiology and ecology. Its potential for effective degradation of organic materials underscores the importance of such microorganisms in environmental management and sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomicrobiaceae
GenusAllosphingosinicella
SpeciesAllosphingosinicella indica
Strainstrain Dd16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosphingosinicella indica strain Dd16 chromosome I.

Gene Summary

Adenine Count

462501 bp

Thymine Count

463172 bp

Guanine Count

936667 bp

Cytosine Count

944913 bp

Genome Length

2807353 bp

Protein-coding Genes

2746 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1,2-phenylacetyl-coa epoxidase subunit paaeB9N75_RS12920Not AvailableNegative2608658 - 260973438664.1
1,2-phenylacetyl-coa epoxidase subunit paadB9N75_RS12925Not AvailableNegative2609736 - 261018216072.2
1,2-phenylacetyl-coa epoxidase subunit paacB9N75_RS12930Not AvailableNegative2610311 - 261115630698.4
1,2-phenylacetyl-coa epoxidase subunit paabB9N75_RS14135Not AvailableNegative2611281 - 261156210434.2
1,2-phenylacetyl-coa epoxidase subunit paaaB9N75_RS12940Not AvailableNegative2611705 - 261268837073.9
3-oxoadipyl-coa thiolaseB9N75_RS12945Not AvailableNegative2612761 - 261396341382.7
hydroxyphenylacetyl-coa thioesterase paaiB9N75_RS12950Not AvailableNegative2614055 - 261448014712.5
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paagB9N75_RS12955Not AvailablePositive2614491 - 261527027678.1
phenylacetic acid degradation bifunctional protein paazB9N75_RS12960Not AvailablePositive2615375 - 261739372139.4
glycine zipper 2tm domain-containing proteinB9N75_RS12965Not AvailablePositive2617537 - 261786311481.8

Displaying genes 2631 – 2640 of 2816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.