Allosphingosinicella indica strain Dd16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomicrobiaceae

Genus

Allosphingosinicella

Description

Allosphingosinicella indica strain Dd16 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. This strain is cataloged under the accession number NZ_LT840185.1, which provides a reference for its genomic data and facilitates further research into its genetic characteristics. As a member of the Allosphingosinicella genus, strain Dd16 is likely to exhibit unique metabolic capabilities, particularly in the degradation of complex organic compounds. This feature may be significant for ecological applications, such as bioremediation, where microbial degradation of pollutants is crucial. The single replicon structure may enhance its metabolic efficiency, allowing it to thrive in diverse ecological niches. In summary, Allosphingosinicella indica strain Dd16, with its single replicon and specific genetic accession, presents a promising subject for further study in microbiology and ecology. Its potential for effective degradation of organic materials underscores the importance of such microorganisms in environmental management and sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomicrobiaceae
GenusAllosphingosinicella
SpeciesAllosphingosinicella indica
Strainstrain Dd16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosphingosinicella indica strain Dd16 chromosome I.

Gene Summary

Adenine Count

462501 bp

Thymine Count

463172 bp

Guanine Count

936667 bp

Cytosine Count

944913 bp

Genome Length

2807353 bp

Protein-coding Genes

2746 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
threonine synthaseB9N75_RS12485Not AvailableNegative2524484 - 252571343180.9
nucleotide exchange factor grpeB9N75_RS12490Not AvailableNegative2525706 - 252625720365.0
heat-inducible transcriptional repressor hrcaB9N75_RS12495Not AvailableNegative2526254 - 252729736328.9
ribonuclease phB9N75_RS12500Not AvailablePositive2527405 - 252813625787.7
rdgb/ham1 family non-canonical purine ntp pyrophosphataseB9N75_RS12505Not AvailablePositive2528133 - 252878323029.0
radical sam family heme chaperone hemwB9N75_RS12510Not AvailablePositive2528780 - 252994041687.4
penicillin-binding protein activatorB9N75_RS12515Not AvailableNegative2530143 - 253132441263.4
16s rrna (cytidine(1402)-2'-o)-methyltransferaseB9N75_RS12520Not AvailablePositive2531338 - 253216828619.5
yran family proteinB9N75_RS12525Not AvailablePositive2532165 - 253251513254.0
glutathione synthaseB9N75_RS12530Not AvailablePositive2532590 - 253354334285.0

Displaying genes 2541 – 2550 of 2816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.