Allosphingosinicella indica strain Dd16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomicrobiaceae

Genus

Allosphingosinicella

Description

Allosphingosinicella indica strain Dd16 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. This strain is cataloged under the accession number NZ_LT840185.1, which provides a reference for its genomic data and facilitates further research into its genetic characteristics. As a member of the Allosphingosinicella genus, strain Dd16 is likely to exhibit unique metabolic capabilities, particularly in the degradation of complex organic compounds. This feature may be significant for ecological applications, such as bioremediation, where microbial degradation of pollutants is crucial. The single replicon structure may enhance its metabolic efficiency, allowing it to thrive in diverse ecological niches. In summary, Allosphingosinicella indica strain Dd16, with its single replicon and specific genetic accession, presents a promising subject for further study in microbiology and ecology. Its potential for effective degradation of organic materials underscores the importance of such microorganisms in environmental management and sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomicrobiaceae
GenusAllosphingosinicella
SpeciesAllosphingosinicella indica
Strainstrain Dd16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosphingosinicella indica strain Dd16 chromosome I.

Gene Summary

Adenine Count

462501 bp

Thymine Count

463172 bp

Guanine Count

936667 bp

Cytosine Count

944913 bp

Genome Length

2807353 bp

Protein-coding Genes

2746 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cation diffusion facilitator family transporterB9N75_RS07885Not AvailablePositive1596967 - 159790833820.4
phzf family phenazine biosynthesis proteinB9N75_RS07890Not AvailablePositive1597905 - 159869327803.3
cdf family co(ii)/ni(ii) efflux transporter dmefB9N75_RS07895Not AvailablePositive1598696 - 159966433727.2
apc family permeaseB9N75_RS07900Not AvailablePositive1599661 - 160093543416.2
trna 2-thiouridine(34) synthase mnmaB9N75_RS07905Not AvailableNegative1600921 - 160202739655.2
hypothetical proteinB9N75_RS07910Not AvailablePositive1602118 - 16024149943.96
duf1153 domain-containing proteinB9N75_RS07915Not AvailablePositive1602480 - 160277911223.6
simpl domain-containing proteinB9N75_RS07920Not AvailableNegative1602848 - 160357925550.5
glsb/yeaq/ymge family stress response membrane proteinB9N75_RS07925Not AvailableNegative1603676 - 16039368895.31
efflux rnd transporter periplasmic adaptor subunitB9N75_RS07930Not AvailablePositive1604199 - 160538641290.7

Displaying genes 1631 – 1640 of 2816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.