Allosphingosinicella indica strain Dd16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomicrobiaceae

Genus

Allosphingosinicella

Description

Allosphingosinicella indica strain Dd16 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. This strain is cataloged under the accession number NZ_LT840185.1, which provides a reference for its genomic data and facilitates further research into its genetic characteristics. As a member of the Allosphingosinicella genus, strain Dd16 is likely to exhibit unique metabolic capabilities, particularly in the degradation of complex organic compounds. This feature may be significant for ecological applications, such as bioremediation, where microbial degradation of pollutants is crucial. The single replicon structure may enhance its metabolic efficiency, allowing it to thrive in diverse ecological niches. In summary, Allosphingosinicella indica strain Dd16, with its single replicon and specific genetic accession, presents a promising subject for further study in microbiology and ecology. Its potential for effective degradation of organic materials underscores the importance of such microorganisms in environmental management and sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomicrobiaceae
GenusAllosphingosinicella
SpeciesAllosphingosinicella indica
Strainstrain Dd16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosphingosinicella indica strain Dd16 chromosome I.

Gene Summary

Adenine Count

462501 bp

Thymine Count

463172 bp

Guanine Count

936667 bp

Cytosine Count

944913 bp

Genome Length

2807353 bp

Protein-coding Genes

2746 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fur family transcriptional regulatorB9N75_RS07170Not AvailablePositive1454365 - 145482916732.5
5-(carboxyamino)imidazole ribonucleotide synthaseB9N75_RS07175Not AvailableNegative1454826 - 145589337142.1
5-(carboxyamino)imidazole ribonucleotide mutaseB9N75_RS07180Not AvailableNegative1455890 - 145637516555.0
ggdef domain-containing proteinB9N75_RS07185Not AvailablePositive1456494 - 145711121820.9
2,3-diphosphoglycerate-dependent phosphoglycerate mutaseB9N75_RS07190Not AvailableNegative1457120 - 145780625932.8
m14-type cytosolic carboxypeptidaseB9N75_RS07195Not AvailableNegative1457937 - 145906742181.1
duf4136 domain-containing proteinB9N75_RS07200Not AvailableNegative1459064 - 145968721557.8
udp-glucose 4-epimerase galeB9N75_RS07205Not AvailablePositive1459765 - 146078736336.0
aspartyl/asparaginyl beta-hydroxylase domain-containing proteinB9N75_RS07210Not AvailablePositive1460784 - 146192342825.1
type b 50s ribosomal protein l36B9N75_RS07215Not AvailablePositive1462201 - 14623265057.32

Displaying genes 1481 – 1490 of 2816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.