Allosphingosinicella indica strain Dd16

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomicrobiaceae

Genus

Allosphingosinicella

Description

Allosphingosinicella indica strain Dd16 is characterized by having a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various environments. This strain is cataloged under the accession number NZ_LT840185.1, which provides a reference for its genomic data and facilitates further research into its genetic characteristics. As a member of the Allosphingosinicella genus, strain Dd16 is likely to exhibit unique metabolic capabilities, particularly in the degradation of complex organic compounds. This feature may be significant for ecological applications, such as bioremediation, where microbial degradation of pollutants is crucial. The single replicon structure may enhance its metabolic efficiency, allowing it to thrive in diverse ecological niches. In summary, Allosphingosinicella indica strain Dd16, with its single replicon and specific genetic accession, presents a promising subject for further study in microbiology and ecology. Its potential for effective degradation of organic materials underscores the importance of such microorganisms in environmental management and sustainability efforts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomicrobiaceae
GenusAllosphingosinicella
SpeciesAllosphingosinicella indica
Strainstrain Dd16

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Allosphingosinicella indica strain Dd16 chromosome I.

Gene Summary

Adenine Count

462501 bp

Thymine Count

463172 bp

Guanine Count

936667 bp

Cytosine Count

944913 bp

Genome Length

2807353 bp

Protein-coding Genes

2746 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
exbd/tolr family proteinB9N75_RS06970Not AvailablePositive1418244 - 141866915349.7
m24 family metallopeptidaseB9N75_RS06975Not AvailablePositive1418909 - 142022849006.6
invasion associated locus b family proteinB9N75_RS06980Not AvailableNegative1420338 - 142082917550.1
outer membrane proteinB9N75_RS06985Not AvailablePositive1420973 - 142156020114.4
dna polymerase iii subunit betaB9N75_RS06990Not AvailablePositive1421704 - 142281640348.3
type ii toxin-antitoxin system prlf family antitoxinB9N75_RS06995Not AvailablePositive1422857 - 14230697637.1
type ii toxin-antitoxin system pemk/mazf family toxinB9N75_RS07000Not AvailablePositive1423080 - 142339411630.3
dna replication/repair protein recfB9N75_RS07005Not AvailablePositive1423397 - 142444936222.5
crossover junction endodeoxyribonuclease ruvcB9N75_RS07010Not AvailablePositive1424510 - 142500116550.2
holliday junction branch migration protein ruvaB9N75_RS07015Not AvailablePositive1424998 - 142559420049.4

Displaying genes 1441 – 1450 of 2816 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.