Nitrospira japonica

Kingdom

Pseudomonadati

Phylum

Nitrospirota

Class

Nitrospiria

Order

Nitrospirales

Family

Nitrospiraceae

Genus

Nitrospira

Description

Nitrospira japonica is a noteworthy species within the Nitrospira genus, characterized by its single replicon structure. This trait is significant as it contributes to the organism's genetic stability and adaptability. The species is cataloged under the accession number NZ_LT828648.1, which provides a reference for researchers exploring its genetic and functional attributes. Nitrospira japonica is recognized for its role in the nitrogen cycle, specifically in the oxidation of nitrite to nitrate. This process is essential for maintaining soil and aquatic ecosystems, as it facilitates nutrient availability for various organisms. The efficient conversion of nitrite to nitrate by Nitrospira japonica underscores its importance in promoting plant growth and supporting overall ecosystem health. In summary, Nitrospira japonica, with its single replicon and documented genetic information, plays a crucial role in the nitrogen cycle. Its ability to contribute to the oxidation of nitrite highlights its ecological significance, particularly in nutrient cycling within various environments. Understanding the functions and behaviors of such microorganisms can provide insights into ecosystem management and the maintenance of environmental health.

Taxonomy

KingdomPseudomonadati
PhylumNitrospirota
ClassNitrospiria
OrderNitrospirales
FamilyNitrospiraceae
GenusNitrospira
SpeciesNitrospira japonica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nitrospira japonica isolate Genome sequencing of Nitrospira

Gene Summary

Adenine Count

840259 bp

Thymine Count

836182 bp

Guanine Count

1204330 bp

Cytosine Count

1204046 bp

Genome Length

4084817 bp

Protein-coding Genes

3741 genes

Non-Coding Genes

57 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinNSJP_RS17750Not AvailableNegative3737564 - 373834630222.8
cupin domain-containing proteinNSJP_RS17755Not AvailableNegative3738387 - 373870411710.9
tetratricopeptide repeat proteinNSJP_RS17760Not AvailablePositive3738910 - 374053560300.9
pilz domain-containing proteinNSJP_RS17765Not AvailableNegative3740599 - 374096113601.0
rtcb family proteinNSJP_RS17770Not AvailableNegative3741121 - 374257252597.1
archeaseNSJP_RS17775Not AvailableNegative3742594 - 374302816142.2
m24 family metallopeptidaseNSJP_RS17780Not AvailableNegative3743287 - 374443242213.3
duf3971 domain-containing proteinNSJP_RS17785Not AvailableNegative3744475 - 3747819121058.0
mfs transporterNSJP_RS17790Not AvailablePositive3748058 - 374935945805.1
peptidylprolyl isomeraseNSJP_RS17795Not AvailablePositive3749399 - 375000422657.1

Displaying genes 3531 – 3540 of 3798 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.