Akkermansia glycaniphila

ovoidanaerobic

Kingdom

Pseudomonadati

Phylum

Verrucomicrobiota

Class

Verrucomicrobiia

Order

Verrucomicrobiales

Family

Akkermansiaceae

Genus

Akkermansia

Description

Akkermansia glycaniphila is a Gram-negative, anaerobic bacterium characterized by its ovoid shape and non-motile nature. This species is part of the mesophilic temperature range, with an optimal growth temperature of 29°C. A notable feature of A. glycaniphila is its single replicon, which is an important aspect of its genetic organization. The ability of A. glycaniphila to thrive in anaerobic conditions suggests its ecological role may be significant in environments where oxygen is limited, such as the human gastrointestinal tract. This bacterium is likely to contribute to the gut microbiome, where it may play a role in the fermentation of dietary fibers, potentially influencing host metabolism and immune function. The presence of a true flagellum, despite its non-motility, may indicate adaptations for environmental interactions rather than locomotion. This could be relevant for its attachment to mucosal surfaces or for interacting with other microbial community members in the gut. In summary, A. glycaniphila exemplifies an anaerobic, Gram-negative bacterium with distinct morphological and physiological traits that underscore its potential ecological importance, particularly in the context of gut health and microbiome dynamics. Further research could elucidate its specific roles and contributions to gut ecology.

Taxonomy

KingdomPseudomonadati
PhylumVerrucomicrobiota
ClassVerrucomicrobiia
OrderVerrucomicrobiales
FamilyAkkermansiaceae
GenusAkkermansia
SpeciesAkkermansia glycaniphila
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Akkermansia glycaniphila
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Akkermansia glycaniphila isolate APytT chromosome I, complete

Gene Summary

Adenine Count

664540 bp

Thymine Count

637461 bp

Guanine Count

866647 bp

Cytosine Count

905430 bp

Genome Length

3074078 bp

Protein-coding Genes

2514 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinasePYTT_RS11620Not AvailableNegative2784223 - 278502627573.5
phenylalanine--trna ligase subunit betaPYTT_RS11625Not AvailableNegative2785091 - 278758389525.4
phenylalanine--trna ligase subunit alphaPYTT_RS11630Not AvailableNegative2787605 - 278861536986.3
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferasePYTT_RS11635Not AvailablePositive2788852 - 278989236190.2
adenosylcobinamide-gdp ribazoletransferasePYTT_RS11640Not AvailablePositive2789903 - 279064626061.5
cobamide remodeling phosphodiesterase cbirPYTT_RS11645Not AvailablePositive2790646 - 279145231014.1
bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferasePYTT_RS11650Not AvailablePositive2791424 - 279200820472.3
crispr-associated helicase/endonuclease cas3PYTT_RS11655Not AvailablePositive2792094 - 279445788338.2
type i-c crispr-associated protein cas5cPYTT_RS11660Not AvailablePositive2794461 - 279517427108.7
type i-c crispr-associated protein cas8c/csd1PYTT_RS11665Not AvailablePositive2795178 - 279699867719.0

Displaying genes 2331 – 2340 of 2576 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.