Mycolicibacterium rutilum strain DSM 45405

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Mycobacteriaceae

Genus

Mycolicibacterium

Description

Mycolicibacterium rutilum strain DSM 45405 is characterized as a rod-shaped microorganism. This bacterium possesses flagella, which suggests that it has the capability for motility. The genetic information of this strain is represented by a single replicon, indicating a singular circular chromosome structure, which is typical for many bacterial species. The strain is associated with the accession number NZ_LT629971.1, which provides a reference for its genomic data. Such genetic information can be crucial for understanding the metabolic pathways and potential applications of Mycolicibacterium rutilum in various biotechnological contexts. In an ecological context, the presence of flagella may enable Mycolicibacterium rutilum to navigate its environment more effectively, potentially contributing to its survival and interaction with other microorganisms. The rod shape may also influence its ability to colonize different niches and its overall ecological role. Understanding the specific behaviors and interactions of this strain in its natural habitat could provide insights into its ecological significance and potential applications in microbiology, such as in bioremediation or as a model organism for studying bacterial motility and behavior.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyMycobacteriaceae
GenusMycolicibacterium
SpeciesMycolicibacterium rutilum
Strainstrain DSM 45405

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mycolicibacterium rutilum strain DSM 45405 chromosome I.

Gene Summary

Adenine Count

945302 bp

Thymine Count

945379 bp

Guanine Count

2043933 bp

Cytosine Count

2053217 bp

Genome Length

5987931 bp

Protein-coding Genes

5831 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iclr family transcriptional regulatorBLW81_RS08655Not AvailableNegative1795738 - 179648726541.4
protocatechuate 3,4-dioxygenase subunit betaBLW81_RS08660Not AvailablePositive1796560 - 179735729750.9
protocatechuate 3,4-dioxygenase subunit alphaBLW81_RS08665Not AvailablePositive1797357 - 179792620564.3
lyase family proteinBLW81_RS08670Not AvailablePositive1797923 - 179912841787.8
4-carboxymuconolactone decarboxylaseBLW81_RS08675Not AvailablePositive1799125 - 180030641383.4
3-oxoacid coa-transferase subunit aBLW81_RS08680Not AvailablePositive1800303 - 180100124137.9
3-oxoacid coa-transferase subunit bBLW81_RS08685Not AvailablePositive1800998 - 180172025303.6
aldehyde dehydrogenase family proteinBLW81_RS08690Not AvailablePositive1801785 - 180251926130.7
cap domain-containing proteinBLW81_RS08695Not AvailablePositive1802512 - 180310221038.8
cupin domain-containing proteinBLW81_RS08700Not AvailablePositive1803313 - 180380118033.9

Displaying genes 1751 – 1760 of 5886 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.