Arcanobacterium phocae strain DSM 10002

Gram-positiveRodmicroaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Actinomycetales

Family

Actinomycetaceae

Genus

Arcanobacterium

Description

Arcanobacterium phocae strain DSM 10002 is a Gram-positive bacterium characterized by its rod shape and microaerophilic oxygen requirement. This strain possesses a single replicon, indicating a streamlined genomic structure. It is noteworthy for having flagella, which may contribute to its motility in its natural habitat. The strain is cataloged under the accession number NZ_LT629804.1, providing a reference point for researchers interested in its genetic makeup and potential applications. The microaerophilic nature of A. phocae suggests that it thrives in environments with limited oxygen, which could influence its ecological niche. In terms of biological and ecological insight, the presence of flagella in A. phocae may facilitate its movement in aquatic environments, potentially contributing to its survival and interaction with other microbial communities. Understanding this strain's adaptations to microaerobic conditions can provide valuable information about its role in marine ecosystems, especially in relation to nutrient cycling and interactions with other microorganisms.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderActinomycetales
FamilyActinomycetaceae
GenusArcanobacterium
SpeciesArcanobacterium phocae
Strainstrain DSM 10002

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Arcanobacterium phocae strain DSM 10002
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Arcanobacterium phocae strain DSM 10002 chromosome I.

Gene Summary

Adenine Count

499504 bp

Thymine Count

500240 bp

Guanine Count

499222 bp

Cytosine Count

499276 bp

Genome Length

1998342 bp

Protein-coding Genes

1751 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal 5'-phosphate synthase lyase subunit pdxsBLT51_RS05300Not AvailablePositive1203184 - 120406231486.1
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtBLT51_RS05305Not AvailablePositive1204085 - 120472922733.3
type ii toxin-antitoxin system rele family toxinBLT51_RS05310Not AvailableNegative1204744 - 120502810867.0
type ii toxin-antitoxin system relb family antitoxinBLT51_RS05315Not AvailableNegative1205025 - 12052438426.9
helix-turn-helix transcriptional regulatorBLT51_RS05320Not AvailableNegative1205322 - 12055167405.81
hypothetical proteinBLT51_RS05325Not AvailableNegative1205513 - 120596816613.6
hypothetical proteinBLT51_RS05335Not AvailableNegative1206622 - 120704414813.8
hypothetical proteinBLT51_RS05340Not AvailableNegative1207023 - 12072839237.14
hypothetical proteinBLT51_RS09095Not AvailablePositive1207982 - 12081345637.86
anti-sigma factorBLT51_RS05345Not AvailableNegative1208227 - 120891324415.8

Displaying genes 1071 – 1080 of 1818 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.