Pseudomonas vancouverensis strain LMG 20222

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas vancouverensis strain LMG 20222, characterized by a single replicon, is cataloged under the accession number NZ_LT629803.1. This strain belongs to the Pseudomonas genus, which is known for its metabolic diversity and ecological versatility. Pseudomonas species are often associated with various environments, including soil and water, and can play significant roles in nutrient cycling and bioremediation. The presence of a single replicon in Pseudomonas vancouverensis LMG 20222 is notable, as it may influence the genetic stability and adaptability of the strain. This trait can affect how the organism responds to environmental stresses and its potential for horizontal gene transfer, which is a common feature in Pseudomonas species, facilitating the acquisition of new metabolic capabilities. Understanding the genetic framework of Pseudomonas vancouverensis LMG 20222 through its accession data can provide insights into the mechanisms that allow this strain to thrive in diverse ecological niches. The ecological implications of this strain could be significant, particularly in its potential application for bioremediation efforts, where the ability to degrade pollutants or contribute to nutrient cycling could be harnessed. Overall, Pseudomonas vancouverensis strain LMG 20222 exemplifies the adaptive traits of its genus, highlighting its ecological importance and potential utility in environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas vancouverensis
Strainstrain LMG 20222

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas vancouverensis strain LMG 20222
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas vancouverensis strain LMG 20222 chromosome I.

Gene Summary

Adenine Count

1280531 bp

Thymine Count

1282577 bp

Guanine Count

1935422 bp

Cytosine Count

1926275 bp

Genome Length

6424905 bp

Protein-coding Genes

5714 genes

Non-Coding Genes

222 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
division/cell wall cluster transcriptional repressor mrazBLV08_RS00480Not AvailablePositive95287 - 9574217049.6
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhBLV08_RS00485Not AvailablePositive95739 - 9668634438.3
cell division protein ftslBLV08_RS00490Not AvailablePositive96683 - 9697610768.3
peptidoglycan d,d-transpeptidase ftsi family proteinBLV08_RS00495Not AvailablePositive96976 - 9871562976.4
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseBLV08_RS00500Not AvailablePositive98715 - 10017852068.4
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseBLV08_RS00505Not AvailablePositive100171 - 10153847332.7
phospho-n-acetylmuramoyl-pentapeptide- transferaseBLV08_RS00510Not AvailablePositive101538 - 10262039458.5
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseBLV08_RS00515Not AvailablePositive102626 - 10397247734.3
putative lipid ii flippase ftswBLV08_RS00520Not AvailablePositive103969 - 10518644331.5
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseBLV08_RS00525Not AvailablePositive105176 - 10624637834.2

Displaying genes 271 – 280 of 5936 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.