Pseudomonas yamanorum strain LMG 27247

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas yamanorum strain LMG 27247 is characterized by a single replicon, indicating a streamlined genomic structure. Its genetic information can be accessed through the accession number NZ_LT629793.1, which provides a reference for further studies on this strain. As a member of the Pseudomonas genus, P. yamanorum is likely to exhibit traits common to this group, such as metabolic versatility and adaptability to various environments. Pseudomonas species are known for their ability to thrive in diverse ecological niches, often playing significant roles in soil and aquatic ecosystems. They are capable of degrading a wide range of organic compounds, which contributes to nutrient cycling and ecosystem health. The presence of a single replicon in Pseudomonas yamanorum strain LMG 27247 suggests a potential for efficient replication and regulation of its genomic content. This could be advantageous in competitive environments, allowing for rapid adaptation and survival. Furthermore, understanding the genetic makeup and traits of this strain could provide insights into its ecological roles and applications, particularly in bioremediation or agriculture. In summary, Pseudomonas yamanorum strain LMG 27247, with its single replicon and accessible genomic data, represents a valuable subject for studying the ecological contributions of Pseudomonas species in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas yamanorum
Strainstrain LMG 27247

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas yamanorum strain LMG 27247
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas yamanorum strain LMG 27247 chromosome I.

Gene Summary

Adenine Count

1406552 bp

Thymine Count

1404644 bp

Guanine Count

2139917 bp

Cytosine Count

2136312 bp

Genome Length

7087525 bp

Protein-coding Genes

6273 genes

Non-Coding Genes

190 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system contractile sheath small subunitBLU46_RS16850Not AvailableNegative3595406 - 359591218403.2
type vi secretion system protein tssaBLU46_RS16855Not AvailableNegative3595967 - 359698636568.9
type vi secretion system-associated fha domain protein taghBLU46_RS16860Not AvailablePositive3597391 - 359871948782.8
type vi secretion system lipoprotein tssjBLU46_RS16865Not AvailablePositive3598772 - 359927818184.7
type vi secretion system baseplate subunit tsskBLU46_RS16870Not AvailablePositive3599293 - 360062748631.2
dotu family type vi secretion system proteinBLU46_RS16875Not AvailablePositive3600634 - 360192347046.7
type vi secretion system membrane subunit tssmBLU46_RS16880Not AvailablePositive3601920 - 3605420128667.0
type vi secretion system-associated protein tagfBLU46_RS16885Not AvailablePositive3605417 - 360607023062.4
pp2c family protein-serine/threonine phosphataseBLU46_RS16890Not AvailablePositive3606071 - 360679025734.7
serine/threonine-protein kinaseBLU46_RS16895Not AvailablePositive3606787 - 3609804108482.0

Displaying genes 3381 – 3390 of 6463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.