Pseudomonas yamanorum strain LMG 27247

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas yamanorum strain LMG 27247 is characterized by a single replicon, indicating a streamlined genomic structure. Its genetic information can be accessed through the accession number NZ_LT629793.1, which provides a reference for further studies on this strain. As a member of the Pseudomonas genus, P. yamanorum is likely to exhibit traits common to this group, such as metabolic versatility and adaptability to various environments. Pseudomonas species are known for their ability to thrive in diverse ecological niches, often playing significant roles in soil and aquatic ecosystems. They are capable of degrading a wide range of organic compounds, which contributes to nutrient cycling and ecosystem health. The presence of a single replicon in Pseudomonas yamanorum strain LMG 27247 suggests a potential for efficient replication and regulation of its genomic content. This could be advantageous in competitive environments, allowing for rapid adaptation and survival. Furthermore, understanding the genetic makeup and traits of this strain could provide insights into its ecological roles and applications, particularly in bioremediation or agriculture. In summary, Pseudomonas yamanorum strain LMG 27247, with its single replicon and accessible genomic data, represents a valuable subject for studying the ecological contributions of Pseudomonas species in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas yamanorum
Strainstrain LMG 27247

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas yamanorum strain LMG 27247
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas yamanorum strain LMG 27247 chromosome I.

Gene Summary

Adenine Count

1406552 bp

Thymine Count

1404644 bp

Guanine Count

2139917 bp

Cytosine Count

2136312 bp

Genome Length

7087525 bp

Protein-coding Genes

6273 genes

Non-Coding Genes

190 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinBLU46_RS16800Not AvailableNegative3579583 - 358015221617.0
rhs repeat-associated core domain-containing proteinBLU46_RS16805Not AvailableNegative3580166 - 3584560162981.0
dcrb-related proteinBLU46_RS16810Not AvailableNegative3584573 - 358500716058.3
type vi secretion system vgr family proteinBLU46_RS16815Not AvailableNegative3585023 - 358696372729.0
type vi secretion system atpase tsshBLU46_RS16820Not AvailableNegative3587122 - 358979497675.4
type vi secretion system baseplate subunit tssgBLU46_RS16825Not AvailableNegative3589787 - 359083039291.2
type vi secretion system baseplate subunit tssfBLU46_RS16830Not AvailableNegative3590794 - 359265369282.8
type vi secretion system baseplate subunit tsseBLU46_RS16835Not AvailableNegative3592650 - 359316518828.5
hcp family type vi secretion system effectorBLU46_RS16840Not AvailableNegative3593244 - 359373217490.9
type vi secretion system contractile sheath large subunitBLU46_RS16845Not AvailableNegative3593907 - 359540355696.5

Displaying genes 3371 – 3380 of 6463 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.