Stappia sp. ES.058

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia sp. ES.058 is a Gram-negative rod-shaped bacterium characterized by a single replicon. This organism is classified under the genus Stappia, which is known to encompass various species of environmental significance. The specific accession number for Stappia sp. ES.058 is NZ_LT629784.1, which provides a reference for genomic information. The Gram-negative nature of Stappia sp. ES.058 indicates that it possesses an outer membrane containing lipopolysaccharides, which can influence its interactions with the environment, including its susceptibility to antibiotics and its role in ecological processes. The rod shape is a common morphology among bacteria that can contribute to motility and colonization capabilities in various habitats. Stappia species are often associated with diverse environments, including marine systems, where they may play roles in nutrient cycling and the degradation of organic matter. The presence of a single replicon suggests a streamlined genomic organization, which can be advantageous for survival in fluctuating environmental conditions. In summary, Stappia sp. ES.058 exemplifies the characteristics of Gram-negative, rod-shaped bacteria with ecological roles that may involve interactions with organic materials in its habitat. Understanding such traits is crucial for elucidating the potential contributions of this bacterium to its ecosystem.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia sp. ES.058
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stappia sp. ES.058 chromosome I.

Gene Summary

Adenine Count

843811 bp

Thymine Count

839857 bp

Guanine Count

1468009 bp

Cytosine Count

1474477 bp

Genome Length

4626254 bp

Protein-coding Genes

4221 genes

Non-Coding Genes

133 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromate efflux transporterBLU32_RS15980Not AvailablePositive3447225 - 344857746359.5
marr family winged helix-turn-helix transcriptional regulatorBLU32_RS15985Not AvailableNegative3448589 - 344906217381.9
nad(p)h-dependent oxidoreductaseBLU32_RS15990Not AvailableNegative3449229 - 344981622073.8
nad(p)h-dependent oxidoreductaseBLU32_RS15995Not AvailableNegative3449826 - 345040722035.8
fad-binding oxidoreductaseBLU32_RS16000Not AvailableNegative3450420 - 345181750981.7
cytosine deaminaseBLU32_RS16005Not AvailableNegative3451837 - 345316547528.6
abc transporter permeaseBLU32_RS16010Not AvailableNegative3453158 - 345403031651.4
abc transporter atp-binding proteinBLU32_RS16015Not AvailableNegative3454083 - 345491930345.4
abc transporter substrate-binding proteinBLU32_RS16020Not AvailableNegative3454954 - 345599737455.2
rida family proteinBLU32_RS16025Not AvailablePositive3456410 - 345679313617.5

Displaying genes 3251 – 3260 of 4354 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.