Halopseudomonas litoralis strain 2SM5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Halopseudomonas

Description

Halopseudomonas litoralis strain 2SM5 is a notable bacterium characterized by a single replicon, which indicates its genetic material is organized within a single circular chromosome. The strain is cataloged under the accession number NZ_LT629748.1, which provides a reference for its genomic data in various biological databases. This bacterium belongs to the genus Halopseudomonas, known for thriving in saline environments. Such adaptations make Halopseudomonas litoralis strain 2SM5 an interesting subject of study, particularly concerning its potential roles in biogeochemical cycles and its applications in biotechnology. The unique features of this strain may be leveraged in various industrial processes, especially those that require the breakdown of organic compounds under saline conditions. In ecological terms, Halopseudomonas litoralis strain 2SM5 may contribute to the microbial diversity and functionality of its native habitat, particularly in coastal or saline ecosystems. Its ability to adapt to high salinity can provide insights into microbial resilience and the mechanisms that allow life to flourish in extreme environments. Understanding such traits could be crucial for bioremediation efforts and the development of microorganisms for use in saline agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusHalopseudomonas
SpeciesHalopseudomonas litoralis
Strainstrain 2SM5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopseudomonas litoralis strain 2SM5 chromosome I.

Gene Summary

Adenine Count

826178 bp

Thymine Count

827007 bp

Guanine Count

1173048 bp

Cytosine Count

1161609 bp

Genome Length

3987942 bp

Protein-coding Genes

3632 genes

Non-Coding Genes

202 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)h-dependent flavin oxidoreductaseBLU11_RS02055Not AvailableNegative401329 - 40239337058.3
hdod domain-containing proteinBLU11_RS02060Not AvailableNegative402437 - 40327030727.9
ygfz/gcvt domain-containing proteinBLU11_RS02065Not AvailableNegative403300 - 40428635833.7
succinate dehydrogenase assembly factor 2BLU11_RS02070Not AvailablePositive404431 - 40468510265.3
hypothetical proteinBLU11_RS02075Not AvailablePositive404669 - 40512117070.4
l-aspartate oxidaseBLU11_RS02080Not AvailableNegative405090 - 40670359520.4
rna polymerase sigma factor rpoeBLU11_RS02085Not AvailablePositive406941 - 40751622002.1
sigma-e factor negative regulatory proteinBLU11_RS02090Not AvailablePositive407569 - 40818321880.7
mucb/rseb c-terminal domain-containing proteinBLU11_RS02095Not AvailablePositive408183 - 40913635399.0
soxr reducing system rsec family proteinBLU11_RS02100Not AvailablePositive409133 - 40960916858.6

Displaying genes 581 – 590 of 3834 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.