Halopseudomonas litoralis strain 2SM5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Halopseudomonas

Description

Halopseudomonas litoralis strain 2SM5 is a notable bacterium characterized by a single replicon, which indicates its genetic material is organized within a single circular chromosome. The strain is cataloged under the accession number NZ_LT629748.1, which provides a reference for its genomic data in various biological databases. This bacterium belongs to the genus Halopseudomonas, known for thriving in saline environments. Such adaptations make Halopseudomonas litoralis strain 2SM5 an interesting subject of study, particularly concerning its potential roles in biogeochemical cycles and its applications in biotechnology. The unique features of this strain may be leveraged in various industrial processes, especially those that require the breakdown of organic compounds under saline conditions. In ecological terms, Halopseudomonas litoralis strain 2SM5 may contribute to the microbial diversity and functionality of its native habitat, particularly in coastal or saline ecosystems. Its ability to adapt to high salinity can provide insights into microbial resilience and the mechanisms that allow life to flourish in extreme environments. Understanding such traits could be crucial for bioremediation efforts and the development of microorganisms for use in saline agricultural practices.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusHalopseudomonas
SpeciesHalopseudomonas litoralis
Strainstrain 2SM5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Halopseudomonas litoralis strain 2SM5 chromosome I.

Gene Summary

Adenine Count

826178 bp

Thymine Count

827007 bp

Guanine Count

1173048 bp

Cytosine Count

1161609 bp

Genome Length

3987942 bp

Protein-coding Genes

3632 genes

Non-Coding Genes

202 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan dd-metalloendopeptidase family proteinBLU11_RS18805Not AvailableNegative3908977 - 391043452511.9
tyrosine--trna ligaseBLU11_RS18810Not AvailablePositive3910673 - 391187244238.4
16s ribosomal rnaNot AvailableNot AvailablePositive3912404 - 3913940Not Available
Trna-ileNot AvailableNot AvailablePositive3914050 - 3914126Not Available
Trna-alaNot AvailableNot AvailablePositive3914160 - 3914235Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive3914528 - 3917419Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive3917574 - 3917689Not Available
thiosulfate abc transporter substrate-binding protein cyspBLU11_RS18840Not AvailablePositive3917936 - 391890435885.9
sulfate abc transporter permease subunit cystBLU11_RS18845Not AvailablePositive3918917 - 391978331268.9
sulfate abc transporter permease subunit cyswBLU11_RS18850Not AvailablePositive3919789 - 392065231786.3

Displaying genes 3771 – 3780 of 3834 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.