Pseudomonas antarctica strain LMG 22709

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas antarctica strain LMG 22709 is characterized by having a single replicon, which is indicative of its genomic organization. The genomic data for this strain can be accessed under the accession number NZ_LT629704.1. This strain belongs to the Pseudomonas genus, a group known for its metabolic diversity and environmental adaptability. Pseudomonas species are often found in various environments, including soil, water, and plant surfaces. Their ability to thrive in diverse ecological niches is attributed to their versatile metabolic pathways, which allow them to utilize a wide range of carbon sources. This adaptability is crucial for their survival in competitive ecosystems. The unique traits of Pseudomonas antarctica strain LMG 22709 provide insights into its potential ecological roles. Its single replicon may suggest a streamlined genetic structure, which could be advantageous for rapid adaptation and survival in fluctuating environmental conditions. Such characteristics may enable this strain to play significant roles in biogeochemical cycles, particularly in cold environments where Pseudomonas antarctica is often isolated. Overall, the genomic features of Pseudomonas antarctica strain LMG 22709 underscore its ecological versatility and potential contributions to microbial communities in various habitats, particularly in cold climates. The ability to maintain a stable genomic structure while adapting to diverse environments exemplifies the resilience of this species within the microbial world.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas antarctica
Strainstrain LMG 22709

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas antarctica strain LMG 22709
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas antarctica strain LMG 22709 chromosome I.

Gene Summary

Adenine Count

1294761 bp

Thymine Count

1286648 bp

Guanine Count

1897842 bp

Cytosine Count

1897823 bp

Genome Length

6377174 bp

Protein-coding Genes

5663 genes

Non-Coding Genes

234 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system contractile sheath large subunitBLQ27_RS16700Not AvailablePositive3667289 - 366876755695.0
type vi secretion system baseplate subunit tsseBLQ27_RS16705Not AvailablePositive3668782 - 366918314604.8
type vi secretion system baseplate subunit tssfBLQ27_RS16710Not AvailablePositive3669173 - 367096067219.4
type vi secretion system baseplate subunit tssgBLQ27_RS16715Not AvailablePositive3670924 - 367193138202.2
aaa family atpaseBLQ27_RS16720Not AvailablePositive3671944 - 367436788426.9
sigma-54 interaction domain-containing proteinBLQ27_RS16725Not AvailablePositive3674367 - 367590555847.5
type vi secretion proteinBLQ27_RS30300Not AvailablePositive3675989 - 36761204894.83
type vi secretion system-associated fha domain protein taghBLQ27_RS16735Not AvailablePositive3676138 - 367731342932.5
type vi secretion system lipoprotein tssjBLQ27_RS16740Not AvailablePositive3677319 - 367780417617.4
type vi secretion system baseplate subunit tsskBLQ27_RS16745Not AvailablePositive3677806 - 367913448845.1

Displaying genes 3471 – 3480 of 5897 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.