Dickeya aquatica strain 174/2

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Dickeya

Description

Dickeya aquatica strain 174/2 is a rod-shaped bacterium characterized by the presence of flagella, which contributes to its motility. This strain possesses a single replicon, indicating a streamlined genomic organization that may influence its adaptability and reproduction. The strain is cataloged under the accession number NZ_LT615367.1, providing a reference for further genomic studies. The motility conferred by its flagella may play a significant role in the ecological interactions of Dickeya aquatica, potentially facilitating its colonization in aquatic environments. As a member of the Dickeya genus, which is known for its plant pathogenic species, D. aquatica may engage in complex biological interactions within its habitat. The presence of a single replicon suggests a focused evolutionary strategy, likely enabling efficient resource utilization in its ecological niche. This trait may enhance its survival in various environments, including both aquatic and plant-associated habitats. In summary, the motile, rod-shaped morphology of Dickeya aquatica strain 174/2, combined with its genomic structure, suggests an adaptive strategy that could influence its ecological roles, particularly in aquatic ecosystems or as a potential plant-associated bacterium. Understanding these traits can provide insights into the ecological dynamics of this strain and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusDickeya
SpeciesDickeya aquatica
Strainstrain 174/2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatFresh water
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dickeya aquatica strain 174/2 chromosome 1, complete sequence.

Gene Summary

Adenine Count

1044421 bp

Thymine Count

1046004 bp

Guanine Count

1202261 bp

Cytosine Count

1208874 bp

Genome Length

4501560 bp

Protein-coding Genes

3727 genes

Non-Coding Genes

375 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyltransferase family 2 proteinDAQ1742_RS02190Not AvailableNegative486079 - 48682827618.8
capsular biosynthesis proteinDAQ1742_RS02195Not AvailableNegative486833 - 48722215123.1
hypothetical proteinDAQ1742_RS02200Not AvailableNegative487215 - 48868457159.7
lysylphosphatidylglycerol synthase domain-containing proteinDAQ1742_RS02205Not AvailableNegative488677 - 48955833624.2
glycosyltransferase family 2 proteinDAQ1742_RS02210Not AvailableNegative489560 - 49037531504.7
gtra family proteinDAQ1742_RS02215Not AvailableNegative490383 - 49080816086.1
2-iminobutanoate/2-iminopropanoate deaminaseDAQ1742_RS02220Not AvailableNegative491440 - 49182613569.3
aspartate carbamoyltransferase regulatory subunitDAQ1742_RS02225Not AvailableNegative491926 - 49239017397.1
is630 family transposaseDAQ1742_RS02230Not AvailableNegative492405 - 49333934884.8
hypothetical proteinDAQ1742_RS02235Not AvailablePositive493432 - 49384514761.6

Displaying genes 781 – 790 of 4102 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.