Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiolase domain-containing protein | VAR608DRAFT_RS04395 | Not Available | Negative | 968571 - 969740 | 40609.5 |
| feruloyl-coa synthase | VAR608DRAFT_RS04400 | Not Available | Negative | 969737 - 971560 | 66680.0 |
| fumarylacetoacetate hydrolase family protein | VAR608DRAFT_RS04405 | Not Available | Negative | 971582 - 972574 | 36113.5 |
| glyoxalase | VAR608DRAFT_RS36735 | Not Available | Positive | 972998 - 974086 | 40112.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAR608DRAFT_RS04420 | Not Available | Positive | 974133 - 975116 | 34732.4 |
| 3-keto-5-aminohexanoate cleavage protein | VAR608DRAFT_RS04425 | Not Available | Negative | 975303 - 976187 | 31408.0 |
| efflux rnd transporter permease subunit | VAR608DRAFT_RS04430 | Not Available | Negative | 976202 - 978604 | 86669.3 |
| wd40/yvtn/bnr-like repeat-containing protein | VAR608DRAFT_RS04435 | Not Available | Negative | 978601 - 979674 | 38062.6 |
| duf1329 domain-containing protein | VAR608DRAFT_RS04440 | Not Available | Negative | 979688 - 981052 | 50198.2 |
| duf1302 domain-containing protein | VAR608DRAFT_RS04445 | Not Available | Negative | 981069 - 982640 | 56381.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
