Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m16 family metallopeptidase | VAR608DRAFT_RS04060 | Not Available | Negative | 896204 - 897442 | 44506.0 |
| helix-turn-helix domain-containing protein | VAR608DRAFT_RS04065 | Not Available | Negative | 897524 - 897781 | 8677.55 |
| hypothetical protein | VAR608DRAFT_RS04070 | Not Available | Positive | 898012 - 898272 | 9534.03 |
| hypothetical protein | VAR608DRAFT_RS36725 | Not Available | Negative | 898319 - 898600 | 10104.3 |
| hypothetical protein | VAR608DRAFT_RS04075 | Not Available | Negative | 898625 - 898870 | 9060.2 |
| taud/tfda dioxygenase family protein | VAR608DRAFT_RS04080 | Not Available | Positive | 899569 - 900480 | 34178.8 |
| 3-keto-5-aminohexanoate cleavage protein | VAR608DRAFT_RS04085 | Not Available | Positive | 900508 - 901566 | 38745.1 |
| sulfatase-like hydrolase/transferase | VAR608DRAFT_RS04090 | Not Available | Positive | 901698 - 903308 | 58846.3 |
| hypothetical protein | VAR608DRAFT_RS04095 | Not Available | Positive | 903418 - 903651 | 8672.69 |
| marr family winged helix-turn-helix transcriptional regulator | VAR608DRAFT_RS04100 | Not Available | Negative | 903941 - 904417 | 18005.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
