Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | VAR608DRAFT_RS03960 | Not Available | Negative | 875950 - 877542 | 58097.3 |
| c-type cytochrome | VAR608DRAFT_RS03965 | Not Available | Positive | 877788 - 878492 | 25359.5 |
| c-type cytochrome | VAR608DRAFT_RS03970 | Not Available | Positive | 878489 - 879763 | 45255.6 |
| duf2970 domain-containing protein | VAR608DRAFT_RS03975 | Not Available | Positive | 879799 - 879984 | 6440.14 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS03980 | Not Available | Negative | 880036 - 880677 | 23394.3 |
| carbohydrate abc transporter permease | VAR608DRAFT_RS03985 | Not Available | Negative | 881224 - 882078 | 31164.8 |
| carbohydrate abc transporter permease | VAR608DRAFT_RS03990 | Not Available | Negative | 882080 - 883018 | 34295.1 |
| abc transporter atp-binding protein | VAR608DRAFT_RS03995 | Not Available | Negative | 883020 - 884039 | 37439.3 |
| abc transporter substrate-binding protein | VAR608DRAFT_RS04000 | Not Available | Negative | 884053 - 885426 | 50662.2 |
| transglycosylase domain-containing protein | VAR608DRAFT_RS04005 | Not Available | Positive | 885642 - 888653 | 110933.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
