Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-talarate/galactarate dehydratase | VAR608DRAFT_RS03510 | Not Available | Positive | 782627 - 783820 | 43999.7 |
| nad-dependent epimerase/dehydratase family protein | VAR608DRAFT_RS03515 | Not Available | Positive | 783938 - 784792 | 30590.3 |
| mandelate racemase/muconate lactonizing enzyme family protein | VAR608DRAFT_RS03520 | Not Available | Positive | 784789 - 785877 | 39432.3 |
| lysr family transcriptional regulator | VAR608DRAFT_RS03525 | Not Available | Negative | 785893 - 786807 | 32647.2 |
| gallate dioxygenase | VAR608DRAFT_RS03530 | Not Available | Positive | 786988 - 788298 | 48484.5 |
| mfs transporter | VAR608DRAFT_RS03535 | Not Available | Positive | 788328 - 789668 | 46112.8 |
| subtype b tannase | VAR608DRAFT_RS03540 | Not Available | Positive | 789778 - 791733 | 67671.5 |
| transporter substrate-binding domain-containing protein | VAR608DRAFT_RS03545 | Not Available | Negative | 791792 - 792598 | 29030.1 |
| amino acid abc transporter atp-binding protein | VAR608DRAFT_RS03550 | Not Available | Negative | 792630 - 793358 | 26262.9 |
| amino acid abc transporter permease | VAR608DRAFT_RS03555 | Not Available | Negative | 793342 - 793989 | 23645.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
