Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (uracil(1498)-n(3))-methyltransferase | VAR608DRAFT_RS36475 | Not Available | Positive | 7712358 - 7713068 | 24971.7 |
| m20/m25/m40 family metallo-hydrolase | VAR608DRAFT_RS36480 | Not Available | Positive | 7713102 - 7714457 | 47335.8 |
| yidb family protein | VAR608DRAFT_RS36485 | Not Available | Positive | 7714504 - 7714971 | 15104.2 |
| mfs transporter | VAR608DRAFT_RS36490 | Not Available | Positive | 7715050 - 7716219 | 41408.8 |
| alpha/beta hydrolase | VAR608DRAFT_RS36495 | Not Available | Negative | 7716221 - 7717066 | 30199.9 |
| m20 family metallopeptidase | VAR608DRAFT_RS36500 | Not Available | Negative | 7717063 - 7718559 | 53576.0 |
| duf72 domain-containing protein | VAR608DRAFT_RS36505 | Not Available | Positive | 7718689 - 7719513 | 30438.0 |
| polymer-forming cytoskeletal protein | VAR608DRAFT_RS36510 | Not Available | Negative | 7719521 - 7720054 | 18194.7 |
| impact family protein | VAR608DRAFT_RS36515 | Not Available | Negative | 7720186 - 7720773 | 20732.0 |
| methionine biosynthesis protein metw | VAR608DRAFT_RS36520 | Not Available | Negative | 7720807 - 7721391 | 21735.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
