Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS35540 | Not Available | Negative | 7507802 - 7509150 | 47905.9 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAR608DRAFT_RS35545 | Not Available | Negative | 7509147 - 7510124 | 33791.3 |
| gentisate 1,2-dioxygenase | VAR608DRAFT_RS35550 | Not Available | Negative | 7510288 - 7511358 | 39437.9 |
| acyl-coa thioesterase | VAR608DRAFT_RS35555 | Not Available | Positive | 7511465 - 7511914 | 15925.2 |
| fumarylacetoacetase | VAR608DRAFT_RS35560 | Not Available | Negative | 7511940 - 7513217 | 45872.2 |
| homogentisate 1,2-dioxygenase | VAR608DRAFT_RS35565 | Not Available | Negative | 7513214 - 7514518 | 48219.9 |
| duf2783 domain-containing protein | VAR608DRAFT_RS35570 | Not Available | Negative | 7514546 - 7514749 | 7270.5 |
| fad-dependent oxidoreductase | VAR608DRAFT_RS35575 | Not Available | Negative | 7514754 - 7516439 | 62040.2 |
| mbl fold metallo-hydrolase | VAR608DRAFT_RS35580 | Not Available | Negative | 7516444 - 7517403 | 35316.9 |
| iclr family transcriptional regulator | VAR608DRAFT_RS35585 | Not Available | Positive | 7517528 - 7518355 | 29642.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
