Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shoct domain-containing protein | VAR608DRAFT_RS35440 | Not Available | Negative | 7486935 - 7487312 | 13811.1 |
| duf1049 domain-containing protein | VAR608DRAFT_RS35445 | Not Available | Negative | 7487350 - 7487571 | 8077.38 |
| basic amino acid/polyamine antiporter | VAR608DRAFT_RS35450 | Not Available | Negative | 7487620 - 7489053 | 50234.5 |
| rida family protein | VAR608DRAFT_RS35455 | Not Available | Negative | 7489291 - 7489665 | 13242.1 |
| alpha/beta hydrolase | VAR608DRAFT_RS35460 | Not Available | Negative | 7489662 - 7490549 | 31421.3 |
| tryptophan 2,3-dioxygenase | VAR608DRAFT_RS35465 | Not Available | Negative | 7490555 - 7491415 | 32950.5 |
| aromatic amino acid transaminase | VAR608DRAFT_RS35470 | Not Available | Negative | 7491421 - 7492617 | 43938.6 |
| lrp/asnc family transcriptional regulator | VAR608DRAFT_RS35475 | Not Available | Positive | 7492757 - 7493245 | 18040.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAR608DRAFT_RS35480 | Not Available | Positive | 7493334 - 7494305 | 33425.3 |
| oxaloacetate decarboxylase | VAR608DRAFT_RS35485 | Not Available | Positive | 7494307 - 7495176 | 30229.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
