Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | VAR608DRAFT_RS32980 | Not Available | Positive | 6947369 - 6948256 | 32617.4 |
| lysr family transcriptional regulator | VAR608DRAFT_RS32985 | Not Available | Negative | 6948290 - 6949201 | 33963.6 |
| c-type cytochrome | VAR608DRAFT_RS38340 | Not Available | Positive | 6949298 - 6949423 | 4581.53 |
| indolepyruvate ferredoxin oxidoreductase subunit alpha | VAR608DRAFT_RS32990 | Not Available | Positive | 6949538 - 6951691 | 77390.4 |
| indolepyruvate oxidoreductase subunit beta family protein | VAR608DRAFT_RS32995 | Not Available | Positive | 6951697 - 6953301 | 57573.1 |
| group ii intron reverse transcriptase/maturase | VAR608DRAFT_RS33000 | Not Available | Negative | 6953483 - 6954991 | 57379.8 |
| trap transporter substrate-binding protein | VAR608DRAFT_RS33005 | Not Available | Positive | 6955394 - 6956440 | 37646.9 |
| trap transporter small permease | VAR608DRAFT_RS33010 | Not Available | Positive | 6956440 - 6956985 | 20318.9 |
| trap transporter large permease | VAR608DRAFT_RS33015 | Not Available | Positive | 6956992 - 6958293 | 45868.5 |
| acyl-coa thioesterase | VAR608DRAFT_RS33020 | Not Available | Positive | 6958589 - 6959011 | 15925.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
