Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf779 domain-containing protein | VAR608DRAFT_RS02910 | Not Available | Positive | 645962 - 646369 | 14498.2 |
| transporter substrate-binding domain-containing protein | VAR608DRAFT_RS02915 | Not Available | Negative | 646403 - 647245 | 29959.1 |
| cytochrome c-550 pedf | VAR608DRAFT_RS02920 | Not Available | Negative | 647255 - 647698 | 16095.1 |
| sigma-54-dependent fis family transcriptional regulator | VAR608DRAFT_RS02925 | Not Available | Positive | 648022 - 650124 | 76273.7 |
| pyrroloquinoline quinone biosynthesis protein pqqb | VAR608DRAFT_RS02935 | Not Available | Positive | 650538 - 651470 | 33599.2 |
| pyrroloquinoline-quinone synthase pqqc | VAR608DRAFT_RS02940 | Not Available | Positive | 651467 - 652246 | 30090.8 |
| pyrroloquinoline quinone biosynthesis peptide chaperone pqqd | VAR608DRAFT_RS02945 | Not Available | Positive | 652243 - 652506 | 10172.2 |
| pyrroloquinoline quinone biosynthesis protein pqqe | VAR608DRAFT_RS02950 | Not Available | Positive | 652574 - 653767 | 43798.4 |
| atp-binding cassette domain-containing protein | VAR608DRAFT_RS02955 | Not Available | Positive | 653761 - 654483 | 25993.4 |
| pqq-dependent catabolism-associated beta-propeller protein | VAR608DRAFT_RS02960 | Not Available | Positive | 654496 - 655476 | 34699.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
