Variovorax sp. HW608

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. HW608 is a rod-shaped bacterium characterized by its single replicon. This organism is classified under the genus Variovorax, which is known for its diverse metabolic capabilities and adaptability to varying environmental conditions. The accession number for Variovorax sp. HW608 is NZ_LT607803.1, which provides a reference for genomic studies and further characterization. The rod shape of Variovorax sp. HW608 may be advantageous for motility and nutrient absorption, allowing it to thrive in various habitats. The presence of only one replicon suggests a streamlined genomic architecture, which may contribute to its efficiency in replication and response to environmental changes. In terms of ecological significance, members of the Variovorax genus are often found in diverse environments, including soil and aquatic systems, where they play a role in the degradation of organic compounds. This ability to metabolize a range of substrates can aid in bioremediation efforts, highlighting the ecological importance of Variovorax sp. HW608 in maintaining environmental health and contributing to nutrient cycling. Overall, the traits of Variovorax sp. HW608 underscore its potential utility in biotechnology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. HW608
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. HW608 chromosome I.

Gene Summary

Adenine Count

1292882 bp

Thymine Count

1295452 bp

Guanine Count

2575522 bp

Cytosine Count

2569607 bp

Genome Length

7733665 bp

Protein-coding Genes

7296 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zinc ribbon domain-containing protein yjdmVAR608DRAFT_RS32485Not AvailablePositive6843344 - 684369112287.7
hypothetical proteinVAR608DRAFT_RS32490Not AvailablePositive6843722 - 684412914892.9
lysr family transcriptional regulatorVAR608DRAFT_RS32495Not AvailableNegative6844296 - 684518032575.2
tripartite tricarboxylate transporter substrate binding proteinVAR608DRAFT_RS32500Not AvailablePositive6845314 - 684629134554.0
m20 aminoacylase family proteinVAR608DRAFT_RS32505Not AvailablePositive6846301 - 684747941933.2
porinVAR608DRAFT_RS32510Not AvailableNegative6847480 - 684857737983.9
rna polymerase sigma factor fliaVAR608DRAFT_RS32515Not AvailableNegative6848649 - 684938327816.2
aaa family atpaseVAR608DRAFT_RS32520Not AvailableNegative6849418 - 685023028315.9
flagellar biosynthesis protein flhfVAR608DRAFT_RS32525Not AvailableNegative6850241 - 685268587890.0
flagellar biosynthesis protein flhaVAR608DRAFT_RS32530Not AvailableNegative6852682 - 685477574588.2

Displaying genes 6621 – 6630 of 7394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.