Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | VAR608DRAFT_RS32190 | Not Available | Positive | 6784836 - 6785171 | 12192.5 |
| tolc family outer membrane protein | VAR608DRAFT_RS32195 | Not Available | Positive | 6785322 - 6786860 | 53880.6 |
| integrase catalytic domain-containing protein | VAR608DRAFT_RS32200 | Not Available | Negative | 6787186 - 6788430 | 46601.9 |
| autotransporter outer membrane beta-barrel domain-containing protein | VAR608DRAFT_RS32205 | Not Available | Positive | 6788736 - 6789806 | 38108.9 |
| 3-deoxy-d-manno-octulosonic acid transferase | VAR608DRAFT_RS32210 | Not Available | Negative | 6789833 - 6791206 | 49340.3 |
| phosphomannomutase/phosphoglucomutase | VAR608DRAFT_RS32215 | Not Available | Negative | 6791218 - 6792600 | 48614.4 |
| dna-3-methyladenine glycosylase 2 family protein | VAR608DRAFT_RS32220 | Not Available | Positive | 6792713 - 6794266 | 55524.6 |
| methylated-dna--[protein]-cysteine s-methyltransferase | VAR608DRAFT_RS32225 | Not Available | Positive | 6794281 - 6794781 | 17726.1 |
| dmt family transporter | VAR608DRAFT_RS32230 | Not Available | Positive | 6794778 - 6795746 | 33548.8 |
| duf1345 domain-containing protein | VAR608DRAFT_RS32235 | Not Available | Negative | 6795696 - 6796454 | 27291.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
