Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| superoxide dismutase family protein | VAR608DRAFT_RS32140 | Not Available | Positive | 6775172 - 6775708 | 17649.8 |
| ntp transferase domain-containing protein | VAR608DRAFT_RS32145 | Not Available | Negative | 6775695 - 6776273 | 19558.5 |
| pyridoxamine 5'-phosphate oxidase | VAR608DRAFT_RS32150 | Not Available | Positive | 6776316 - 6776966 | 24596.1 |
| aec family transporter | VAR608DRAFT_RS32155 | Not Available | Negative | 6776973 - 6777920 | 32931.7 |
| acylphosphatase | VAR608DRAFT_RS32160 | Not Available | Negative | 6777964 - 6778272 | 11362.7 |
| peptide-methionine (s)-s-oxide reductase msra | VAR608DRAFT_RS32165 | Not Available | Negative | 6778362 - 6778910 | 20599.1 |
| tetr/acrr family transcriptional regulator | VAR608DRAFT_RS32170 | Not Available | Positive | 6778998 - 6779672 | 25455.8 |
| efflux rnd transporter periplasmic adaptor subunit | VAR608DRAFT_RS32175 | Not Available | Positive | 6779669 - 6780856 | 41395.5 |
| efflux rnd transporter permease subunit | VAR608DRAFT_RS32180 | Not Available | Positive | 6780870 - 6784109 | 117529.0 |
| protein-l-isoaspartate o-methyltransferase family protein | VAR608DRAFT_RS32185 | Not Available | Positive | 6784130 - 6784819 | 25410.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
