Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid deaminase | VAR608DRAFT_RS32040 | Not Available | Negative | 6755082 - 6756353 | 46296.5 |
| abc transporter atp-binding protein | VAR608DRAFT_RS32045 | Not Available | Negative | 6756367 - 6757356 | 36458.9 |
| abc transporter atp-binding protein | VAR608DRAFT_RS32050 | Not Available | Negative | 6757353 - 6758414 | 37950.3 |
| abc transporter permease | VAR608DRAFT_RS32055 | Not Available | Negative | 6758473 - 6759339 | 31135.4 |
| abc transporter permease | VAR608DRAFT_RS32060 | Not Available | Negative | 6759336 - 6760286 | 33874.5 |
| abc transporter substrate-binding protein | VAR608DRAFT_RS32065 | Not Available | Negative | 6760304 - 6761902 | 57764.2 |
| rida family protein | VAR608DRAFT_RS32070 | Not Available | Positive | 6762025 - 6762417 | 14268.0 |
| 2-dehydro-3-deoxygalactonokinase | VAR608DRAFT_RS32075 | Not Available | Positive | 6762556 - 6763458 | 32396.0 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | VAR608DRAFT_RS32080 | Not Available | Positive | 6763455 - 6764096 | 21604.5 |
| site-specific recombinase | VAR608DRAFT_RS32085 | Not Available | Negative | 6764109 - 6766199 | 76219.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
