Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21-like element helper atpase istb | VAR608DRAFT_RS02810 | Not Available | Negative | 627578 - 628357 | 29036.8 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS02815 | Not Available | Negative | 628414 - 629334 | 34397.2 |
| site-specific integrase | VAR608DRAFT_RS02820 | Not Available | Positive | 629484 - 630752 | 47339.9 |
| tyrosine-type recombinase/integrase | VAR608DRAFT_RS02825 | Not Available | Positive | 630749 - 632116 | 52617.0 |
| tyrosine-type recombinase/integrase | VAR608DRAFT_RS02830 | Not Available | Positive | 632113 - 633114 | 37673.6 |
| hypothetical protein | VAR608DRAFT_RS02835 | Not Available | Negative | 633179 - 633820 | 23933.7 |
| dj-1/pfpi family protein | VAR608DRAFT_RS02840 | Not Available | Positive | 634094 - 634432 | 12037.5 |
| hd domain-containing protein | VAR608DRAFT_RS02845 | Not Available | Positive | 634556 - 635197 | 23538.2 |
| glxa family transcriptional regulator | VAR608DRAFT_RS02850 | Not Available | Positive | 635208 - 636242 | 37451.0 |
| nmra family nad(p)-binding protein | VAR608DRAFT_RS02855 | Not Available | Positive | 636553 - 637434 | 32559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
