Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isocitrate lyase | VAR608DRAFT_RS31240 | Not Available | Negative | 6602471 - 6603802 | 48668.2 |
| gamma-glutamylcyclotransferase | VAR608DRAFT_RS31245 | Not Available | Negative | 6604049 - 6604444 | 14100.0 |
| dmt family transporter | VAR608DRAFT_RS31250 | Not Available | Positive | 6604481 - 6605407 | 32388.8 |
| swib/mdm2 domain-containing protein | VAR608DRAFT_RS31255 | Not Available | Positive | 6605591 - 6606010 | 14452.1 |
| thiamine pyrophosphate-binding protein | VAR608DRAFT_RS31260 | Not Available | Negative | 6606078 - 6607793 | 61371.2 |
| 6,7-dimethyl-8-ribityllumazine synthase | VAR608DRAFT_RS31265 | Not Available | Positive | 6608191 - 6608703 | 18740.6 |
| glutathione s-transferase family protein | VAR608DRAFT_RS31270 | Not Available | Positive | 6608749 - 6609426 | 25057.3 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS31275 | Not Available | Positive | 6609447 - 6609812 | 13549.6 |
| mfs transporter | VAR608DRAFT_RS31280 | Not Available | Negative | 6609826 - 6611064 | 42337.5 |
| arac family transcriptional regulator | VAR608DRAFT_RS31285 | Not Available | Positive | 6611154 - 6612065 | 33138.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
