Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl co-a mutase-associated gtpase meab | VAR608DRAFT_RS30930 | Not Available | Negative | 6545502 - 6546557 | 37004.6 |
| methylmalonyl-coa mutase | VAR608DRAFT_RS30935 | Not Available | Negative | 6546560 - 6548719 | 78073.0 |
| gntr family transcriptional regulator | VAR608DRAFT_RS30940 | Not Available | Positive | 6548846 - 6549493 | 24259.2 |
| trna dihydrouridine(20/20a) synthase dusa | VAR608DRAFT_RS30945 | Not Available | Negative | 6549517 - 6550521 | 37863.4 |
| hypothetical protein | VAR608DRAFT_RS30950 | Not Available | Negative | 6550590 - 6550958 | 14273.0 |
| mfs transporter | VAR608DRAFT_RS30955 | Not Available | Positive | 6551114 - 6552337 | 42012.6 |
| mfs transporter | VAR608DRAFT_RS30960 | Not Available | Positive | 6552403 - 6553569 | 39391.7 |
| abc transporter substrate-binding protein | VAR608DRAFT_RS30965 | Not Available | Positive | 6553738 - 6555045 | 47378.8 |
| carbohydrate abc transporter permease | VAR608DRAFT_RS30970 | Not Available | Positive | 6555194 - 6556024 | 30569.3 |
| carbohydrate abc transporter permease | VAR608DRAFT_RS30975 | Not Available | Positive | 6556038 - 6556862 | 30178.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
