Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | VAR608DRAFT_RS30480 | Not Available | Positive | 6447549 - 6449090 | 55278.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS30485 | Not Available | Positive | 6449249 - 6450193 | 32260.6 |
| abc transporter substrate-binding protein | VAR608DRAFT_RS30490 | Not Available | Positive | 6450248 - 6451186 | 32933.6 |
| carbohydrate kinase family protein | VAR608DRAFT_RS30495 | Not Available | Positive | 6451204 - 6452130 | 32601.9 |
| smp-30/gluconolactonase/lre family protein | VAR608DRAFT_RS30500 | Not Available | Positive | 6452135 - 6453031 | 32989.0 |
| winged helix-turn-helix domain-containing protein | VAR608DRAFT_RS30505 | Not Available | Negative | 6453066 - 6453812 | 26635.2 |
| trar/dksa family transcriptional regulator | VAR608DRAFT_RS30510 | Not Available | Negative | 6453847 - 6454251 | 15597.4 |
| universal stress protein | VAR608DRAFT_RS30515 | Not Available | Positive | 6454419 - 6455279 | 30394.7 |
| aaa family atpase | VAR608DRAFT_RS30520 | Not Available | Positive | 6455302 - 6456792 | 54055.9 |
| mechanosensitive ion channel family protein | VAR608DRAFT_RS30525 | Not Available | Negative | 6456766 - 6458442 | 60821.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
