Variovorax sp. HW608

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. HW608 is a rod-shaped bacterium characterized by its single replicon. This organism is classified under the genus Variovorax, which is known for its diverse metabolic capabilities and adaptability to varying environmental conditions. The accession number for Variovorax sp. HW608 is NZ_LT607803.1, which provides a reference for genomic studies and further characterization. The rod shape of Variovorax sp. HW608 may be advantageous for motility and nutrient absorption, allowing it to thrive in various habitats. The presence of only one replicon suggests a streamlined genomic architecture, which may contribute to its efficiency in replication and response to environmental changes. In terms of ecological significance, members of the Variovorax genus are often found in diverse environments, including soil and aquatic systems, where they play a role in the degradation of organic compounds. This ability to metabolize a range of substrates can aid in bioremediation efforts, highlighting the ecological importance of Variovorax sp. HW608 in maintaining environmental health and contributing to nutrient cycling. Overall, the traits of Variovorax sp. HW608 underscore its potential utility in biotechnology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. HW608
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. HW608 chromosome I.

Gene Summary

Adenine Count

1292882 bp

Thymine Count

1295452 bp

Guanine Count

2575522 bp

Cytosine Count

2569607 bp

Genome Length

7733665 bp

Protein-coding Genes

7296 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bambVAR608DRAFT_RS30135Not AvailableNegative6371213 - 637235839738.6
yfgm family proteinVAR608DRAFT_RS30140Not AvailableNegative6372355 - 637305025319.7
histidine--trna ligaseVAR608DRAFT_RS30145Not AvailableNegative6373054 - 637444850685.7
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseVAR608DRAFT_RS30150Not AvailableNegative6374460 - 637575246480.9
helix-turn-helix domain-containing proteinVAR608DRAFT_RS30155Not AvailableNegative6375763 - 637667130636.9
type iv pilus biogenesis/stability protein pilwVAR608DRAFT_RS30160Not AvailableNegative6376664 - 637750030573.1
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnVAR608DRAFT_RS30165Not AvailableNegative6377505 - 637865342126.7
nucleoside-diphosphate kinaseVAR608DRAFT_RS30170Not AvailableNegative6378673 - 637909815254.4
pseudouridine synthaseVAR608DRAFT_RS30175Not AvailableNegative6379250 - 638096561485.8
smc-scp complex subunit scpbVAR608DRAFT_RS30180Not AvailableNegative6380962 - 638171727469.3

Displaying genes 6151 – 6160 of 7394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.