Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bamb | VAR608DRAFT_RS30135 | Not Available | Negative | 6371213 - 6372358 | 39738.6 |
| yfgm family protein | VAR608DRAFT_RS30140 | Not Available | Negative | 6372355 - 6373050 | 25319.7 |
| histidine--trna ligase | VAR608DRAFT_RS30145 | Not Available | Negative | 6373054 - 6374448 | 50685.7 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | VAR608DRAFT_RS30150 | Not Available | Negative | 6374460 - 6375752 | 46480.9 |
| helix-turn-helix domain-containing protein | VAR608DRAFT_RS30155 | Not Available | Negative | 6375763 - 6376671 | 30636.9 |
| type iv pilus biogenesis/stability protein pilw | VAR608DRAFT_RS30160 | Not Available | Negative | 6376664 - 6377500 | 30573.1 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | VAR608DRAFT_RS30165 | Not Available | Negative | 6377505 - 6378653 | 42126.7 |
| nucleoside-diphosphate kinase | VAR608DRAFT_RS30170 | Not Available | Negative | 6378673 - 6379098 | 15254.4 |
| pseudouridine synthase | VAR608DRAFT_RS30175 | Not Available | Negative | 6379250 - 6380965 | 61485.8 |
| smc-scp complex subunit scpb | VAR608DRAFT_RS30180 | Not Available | Negative | 6380962 - 6381717 | 27469.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
