Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66 family insertion sequence element accessory protein tnpb | VAR608DRAFT_RS02600 | Not Available | Negative | 585058 - 585405 | 12825.8 |
| hypothetical protein | VAR608DRAFT_RS02605 | Not Available | Negative | 585402 - 585893 | 17702.0 |
| hypothetical protein | VAR608DRAFT_RS02610 | Not Available | Positive | 585900 - 586358 | 17054.5 |
| tannase/feruloyl esterase family alpha/beta hydrolase | VAR608DRAFT_RS02615 | Not Available | Positive | 587235 - 588938 | 59803.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS02620 | Not Available | Positive | 589254 - 590195 | 34844.8 |
| phage integrase family protein | VAR608DRAFT_RS02625 | Not Available | Positive | 590362 - 592035 | 62273.8 |
| site-specific integrase | VAR608DRAFT_RS02630 | Not Available | Negative | 592022 - 593020 | 37827.1 |
| tyrosine-type recombinase/integrase | VAR608DRAFT_RS02635 | Not Available | Negative | 593017 - 593958 | 36210.7 |
| site-specific integrase | VAR608DRAFT_RS02640 | Not Available | Negative | 593955 - 595193 | 45416.2 |
| hypothetical protein | VAR608DRAFT_RS02650 | Not Available | Negative | 595677 - 596690 | 37090.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
