Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase slt domain-containing protein | VAR608DRAFT_RS29440 | Not Available | Positive | 6225696 - 6227258 | 57191.5 |
| abc transporter permease | VAR608DRAFT_RS29445 | Not Available | Negative | 6227275 - 6228108 | 30268.5 |
| abc transporter atp-binding protein | VAR608DRAFT_RS29450 | Not Available | Negative | 6228110 - 6228925 | 29768.2 |
| abc transporter substrate-binding protein | VAR608DRAFT_RS29455 | Not Available | Negative | 6228974 - 6230008 | 36145.6 |
| recombination mediator recr | VAR608DRAFT_RS29460 | Not Available | Negative | 6230157 - 6230747 | 20955.1 |
| ybab/ebfc family nucleoid-associated protein | VAR608DRAFT_RS29465 | Not Available | Negative | 6230762 - 6231094 | 11801.5 |
| dna polymerase iii subunit gamma/tau | VAR608DRAFT_RS29470 | Not Available | Negative | 6231138 - 6232976 | 65731.9 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 6233100 - 6233196 | Not Available |
| is1595 family transposase | VAR608DRAFT_RS29480 | Not Available | Positive | 6233272 - 6234261 | 36924.2 |
| is110 family transposase | VAR608DRAFT_RS29485 | Not Available | Positive | 6234722 - 6235795 | 40650.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
