Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66-like element accessory protein tnpa | VAR608DRAFT_RS02550 | Not Available | Positive | 576134 - 576550 | 14967.9 |
| is66 family insertion sequence element accessory protein tnpb | VAR608DRAFT_RS02555 | Not Available | Positive | 576547 - 576894 | 12887.7 |
| is66 family transposase | VAR608DRAFT_RS02560 | Not Available | Positive | 576963 - 578198 | 45122.9 |
| hypothetical protein | VAR608DRAFT_RS37385 | Not Available | Negative | 578599 - 578784 | 7044.58 |
| site-specific integrase | VAR608DRAFT_RS02570 | Not Available | Positive | 578787 - 580022 | 46422.1 |
| tyrosine-type recombinase/integrase | VAR608DRAFT_RS02575 | Not Available | Positive | 580031 - 580990 | 36305.2 |
| site-specific integrase | VAR608DRAFT_RS02580 | Not Available | Positive | 580987 - 582003 | 38439.2 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS02585 | Not Available | Positive | 582126 - 582722 | 22058.6 |
| hypothetical protein | VAR608DRAFT_RS02590 | Not Available | Negative | 582875 - 583408 | 19896.8 |
| is66 family transposase | VAR608DRAFT_RS02595 | Not Available | Negative | 583405 - 584973 | 58789.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
