Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sty4526/ypo1902 family pathogenicity island replication protein | VAR608DRAFT_RS28300 | Not Available | Negative | 5989772 - 5990533 | 28571.6 |
| parb family protein | VAR608DRAFT_RS28305 | Not Available | Negative | 5990499 - 5992352 | 68063.4 |
| para family protein | VAR608DRAFT_RS28310 | Not Available | Negative | 5992368 - 5993288 | 33015.6 |
| sugar abc transporter substrate-binding protein | VAR608DRAFT_RS28315 | Not Available | Positive | 5993906 - 5994865 | 33245.5 |
| sugar abc transporter atp-binding protein | VAR608DRAFT_RS28320 | Not Available | Positive | 5994885 - 5996459 | 57073.4 |
| abc transporter permease | VAR608DRAFT_RS28325 | Not Available | Positive | 5996456 - 5997451 | 33859.2 |
| laci family dna-binding transcriptional regulator | VAR608DRAFT_RS28330 | Not Available | Positive | 5997461 - 5998561 | 39202.2 |
| ribokinase | VAR608DRAFT_RS28335 | Not Available | Positive | 5998558 - 5999520 | 32748.2 |
| d-ribose pyranase | VAR608DRAFT_RS28340 | Not Available | Positive | 5999517 - 5999909 | 14078.2 |
| srpbcc family protein | VAR608DRAFT_RS28345 | Not Available | Negative | 5999943 - 6000500 | 20581.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
