Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpch/hpai aldolase/citrate lyase family protein | VAR608DRAFT_RS28050 | Not Available | Positive | 5931428 - 5932258 | 28889.7 |
| 3-carboxy-cis,cis-muconate cycloisomerase | VAR608DRAFT_RS28055 | Not Available | Positive | 5932311 - 5933657 | 49155.6 |
| c4-dicarboxylate transporter dcta | VAR608DRAFT_RS28060 | Not Available | Positive | 5933737 - 5935071 | 47313.5 |
| lysr family transcriptional regulator | VAR608DRAFT_RS28065 | Not Available | Negative | 5935111 - 5936040 | 34406.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAR608DRAFT_RS28070 | Not Available | Positive | 5936039 - 5937181 | 40235.9 |
| 4-oxalomesaconate tautomerase | VAR608DRAFT_RS28075 | Not Available | Positive | 5937183 - 5939207 | 71206.1 |
| tetr/acrr family transcriptional regulator | VAR608DRAFT_RS28080 | Not Available | Negative | 5939344 - 5940006 | 23187.0 |
| alpha/beta fold hydrolase | VAR608DRAFT_RS28085 | Not Available | Positive | 5940141 - 5940998 | 30572.7 |
| voc family protein | VAR608DRAFT_RS28090 | Not Available | Positive | 5941015 - 5942025 | 37183.5 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | VAR608DRAFT_RS28095 | Not Available | Positive | 5942022 - 5943782 | 64869.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
