Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | VAR608DRAFT_RS27755 | Not Available | Negative | 5871700 - 5872209 | 19126.3 |
| putative colanic acid biosynthesis acetyltransferase | VAR608DRAFT_RS27760 | Not Available | Negative | 5872278 - 5872853 | 20637.0 |
| ssra-binding protein smpb | VAR608DRAFT_RS27765 | Not Available | Negative | 5872864 - 5873343 | 18358.3 |
| type ii toxin-antitoxin system rata family toxin | VAR608DRAFT_RS27770 | Not Available | Positive | 5873406 - 5873852 | 16675.8 |
| rnfh family protein | VAR608DRAFT_RS27775 | Not Available | Positive | 5873852 - 5874184 | 11968.5 |
| duf4124 domain-containing protein | VAR608DRAFT_RS27780 | Not Available | Negative | 5874204 - 5874719 | 18610.1 |
| imp dehydrogenase | VAR608DRAFT_RS27785 | Not Available | Positive | 5874892 - 5876361 | 51566.3 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | VAR608DRAFT_RS27790 | Not Available | Positive | 5876446 - 5876694 | 9426.35 |
| type ii toxin-antitoxin system vapc family toxin | VAR608DRAFT_RS27795 | Not Available | Positive | 5876691 - 5877125 | 16046.2 |
| glutamine-hydrolyzing gmp synthase | VAR608DRAFT_RS27800 | Not Available | Positive | 5877129 - 5878742 | 59009.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
