Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimp | VAR608DRAFT_RS27705 | Not Available | Positive | 5860817 - 5861440 | 22353.7 |
| transcription termination factor nusa | VAR608DRAFT_RS27710 | Not Available | Positive | 5861458 - 5862942 | 55005.6 |
| translation initiation factor if-2 | VAR608DRAFT_RS27715 | Not Available | Positive | 5862967 - 5865906 | 104333.0 |
| 30s ribosome-binding factor rbfa | VAR608DRAFT_RS27720 | Not Available | Positive | 5865931 - 5866302 | 13742.5 |
| trna pseudouridine(55) synthase trub | VAR608DRAFT_RS27725 | Not Available | Positive | 5866305 - 5867252 | 33965.8 |
| translational gtpase typa | VAR608DRAFT_RS27730 | Not Available | Positive | 5867249 - 5869081 | 67275.0 |
| dmt family transporter | VAR608DRAFT_RS27735 | Not Available | Positive | 5869081 - 5869998 | 32133.3 |
| yxwgxw repeat-containing protein | VAR608DRAFT_RS27740 | Not Available | Positive | 5870067 - 5870459 | 14483.1 |
| atp-binding protein | VAR608DRAFT_RS27745 | Not Available | Negative | 5870526 - 5870906 | 13185.8 |
| anti-sigma factor family protein | VAR608DRAFT_RS27750 | Not Available | Negative | 5870953 - 5871687 | 26377.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
