Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | VAR608DRAFT_RS27555 | Not Available | Negative | 5828001 - 5828867 | 31178.1 |
| succinyl-diaminopimelate desuccinylase | VAR608DRAFT_RS27560 | Not Available | Negative | 5828864 - 5830039 | 42004.9 |
| pilt/pilu family type 4a pilus atpase | VAR608DRAFT_RS27565 | Not Available | Negative | 5830056 - 5831204 | 42216.0 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | VAR608DRAFT_RS27570 | Not Available | Negative | 5831286 - 5832110 | 29357.1 |
| succinyldiaminopimelate transaminase | VAR608DRAFT_RS27575 | Not Available | Negative | 5832107 - 5833318 | 43865.1 |
| amino-acid n-acetyltransferase | VAR608DRAFT_RS27580 | Not Available | Negative | 5833394 - 5834740 | 49422.5 |
| atp-dependent rna helicase hrpa | VAR608DRAFT_RS27585 | Not Available | Positive | 5834808 - 5838788 | 148267.0 |
| duf3309 family protein | VAR608DRAFT_RS27590 | Not Available | Negative | 5838857 - 5839015 | 5479.24 |
| pyridoxal phosphate-dependent aminotransferase | VAR608DRAFT_RS27595 | Not Available | Negative | 5839126 - 5840298 | 42612.0 |
| cysb family hth-type transcriptional regulator | VAR608DRAFT_RS27600 | Not Available | Negative | 5840295 - 5841236 | 35022.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
