Variovorax sp. HW608

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Variovorax

Description

Variovorax sp. HW608 is a rod-shaped bacterium characterized by its single replicon. This organism is classified under the genus Variovorax, which is known for its diverse metabolic capabilities and adaptability to varying environmental conditions. The accession number for Variovorax sp. HW608 is NZ_LT607803.1, which provides a reference for genomic studies and further characterization. The rod shape of Variovorax sp. HW608 may be advantageous for motility and nutrient absorption, allowing it to thrive in various habitats. The presence of only one replicon suggests a streamlined genomic architecture, which may contribute to its efficiency in replication and response to environmental changes. In terms of ecological significance, members of the Variovorax genus are often found in diverse environments, including soil and aquatic systems, where they play a role in the degradation of organic compounds. This ability to metabolize a range of substrates can aid in bioremediation efforts, highlighting the ecological importance of Variovorax sp. HW608 in maintaining environmental health and contributing to nutrient cycling. Overall, the traits of Variovorax sp. HW608 underscore its potential utility in biotechnology and environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusVariovorax
SpeciesVariovorax sp. HW608
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Variovorax sp. HW608 chromosome I.

Gene Summary

Adenine Count

1292882 bp

Thymine Count

1295452 bp

Guanine Count

2575522 bp

Cytosine Count

2569607 bp

Genome Length

7733665 bp

Protein-coding Genes

7296 genes

Non-Coding Genes

98 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l3 n(5)-glutamine methyltransferaseVAR608DRAFT_RS27555Not AvailableNegative5828001 - 582886731178.1
succinyl-diaminopimelate desuccinylaseVAR608DRAFT_RS27560Not AvailableNegative5828864 - 583003942004.9
pilt/pilu family type 4a pilus atpaseVAR608DRAFT_RS27565Not AvailableNegative5830056 - 583120442216.0
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseVAR608DRAFT_RS27570Not AvailableNegative5831286 - 583211029357.1
succinyldiaminopimelate transaminaseVAR608DRAFT_RS27575Not AvailableNegative5832107 - 583331843865.1
amino-acid n-acetyltransferaseVAR608DRAFT_RS27580Not AvailableNegative5833394 - 583474049422.5
atp-dependent rna helicase hrpaVAR608DRAFT_RS27585Not AvailablePositive5834808 - 5838788148267.0
duf3309 family proteinVAR608DRAFT_RS27590Not AvailableNegative5838857 - 58390155479.24
pyridoxal phosphate-dependent aminotransferaseVAR608DRAFT_RS27595Not AvailableNegative5839126 - 584029842612.0
cysb family hth-type transcriptional regulatorVAR608DRAFT_RS27600Not AvailableNegative5840295 - 584123635022.4

Displaying genes 5631 – 5640 of 7394 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.