Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hpch/hpai aldolase/citrate lyase family protein | VAR608DRAFT_RS02155 | Not Available | Positive | 487958 - 488836 | 30854.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS02160 | Not Available | Positive | 489263 - 489781 | 19813.6 |
| tannase/feruloyl esterase family alpha/beta hydrolase | VAR608DRAFT_RS02165 | Not Available | Positive | 490071 - 491945 | 66520.2 |
| hypothetical protein | VAR608DRAFT_RS02170 | Not Available | Positive | 492097 - 492291 | 6653.11 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS02175 | Not Available | Negative | 492668 - 492898 | 8282.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAR608DRAFT_RS02180 | Not Available | Negative | 493151 - 494134 | 34479.8 |
| enoyl-coa hydratase/isomerase family protein | VAR608DRAFT_RS02185 | Not Available | Negative | 494168 - 494956 | 28457.5 |
| duf2889 domain-containing protein | VAR608DRAFT_RS02190 | Not Available | Negative | 494959 - 495555 | 21905.3 |
| sdr family nad(p)-dependent oxidoreductase | VAR608DRAFT_RS02195 | Not Available | Positive | 495569 - 496525 | 33927.7 |
| marr family winged helix-turn-helix transcriptional regulator | VAR608DRAFT_RS02200 | Not Available | Positive | 496722 - 497141 | 15613.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
