Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacid dehydrogenase | VAR608DRAFT_RS02015 | Not Available | Positive | 450377 - 451345 | 34839.0 |
| helix-turn-helix domain-containing protein | VAR608DRAFT_RS02020 | Not Available | Positive | 451375 - 452301 | 34906.7 |
| ectoine hydrolase doea | VAR608DRAFT_RS02025 | Not Available | Negative | 452687 - 453901 | 45521.7 |
| lysr substrate-binding domain-containing protein | VAR608DRAFT_RS02030 | Not Available | Positive | 454379 - 455311 | 32905.2 |
| caib/baif coa transferase family protein | VAR608DRAFT_RS02035 | Not Available | Positive | 455547 - 456725 | 42771.1 |
| hpch/hpai aldolase/citrate lyase family protein | VAR608DRAFT_RS02040 | Not Available | Positive | 456734 - 457681 | 33502.2 |
| plp-dependent aminotransferase family protein | VAR608DRAFT_RS02045 | Not Available | Negative | 458101 - 459291 | 43691.0 |
| branched-chain amino acid abc transporter substrate-binding protein | VAR608DRAFT_RS02050 | Not Available | Positive | 459625 - 460830 | 41702.9 |
| m14 family metallopeptidase | VAR608DRAFT_RS02060 | Not Available | Positive | 461642 - 462742 | 40836.0 |
| abc transporter substrate-binding protein | VAR608DRAFT_RS02065 | Not Available | Positive | 462884 - 464455 | 57691.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
