Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | VAR608DRAFT_RS00995 | Not Available | Positive | 213840 - 215024 | 41492.6 |
| mfs transporter | VAR608DRAFT_RS01000 | Not Available | Negative | 215021 - 216253 | 43816.9 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | VAR608DRAFT_RS01005 | Not Available | Negative | 216285 - 216929 | 22921.5 |
| hypothetical protein | VAR608DRAFT_RS01010 | Not Available | Positive | 217162 - 217569 | 14748.9 |
| mov34/mpn/pad-1 family protein | VAR608DRAFT_RS01015 | Not Available | Negative | 217645 - 218157 | 18502.0 |
| thif family adenylyltransferase | VAR608DRAFT_RS01020 | Not Available | Negative | 218151 - 218879 | 25863.2 |
| hypothetical protein | VAR608DRAFT_RS01025 | Not Available | Positive | 219705 - 220370 | 24655.6 |
| site-specific integrase | VAR608DRAFT_RS01030 | Not Available | Positive | 220462 - 221730 | 47339.9 |
| tyrosine-type recombinase/integrase | VAR608DRAFT_RS01035 | Not Available | Positive | 221727 - 223094 | 52617.0 |
| tyrosine-type recombinase/integrase | VAR608DRAFT_RS01040 | Not Available | Positive | 223091 - 224092 | 37673.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
