Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine utilization repressor | VAR608DRAFT_RS00845 | Not Available | Positive | 178254 - 178970 | 26865.2 |
| histidine ammonia-lyase | VAR608DRAFT_RS00850 | Not Available | Positive | 179030 - 180601 | 53516.7 |
| urocanate hydratase | VAR608DRAFT_RS00855 | Not Available | Positive | 180642 - 182363 | 62589.6 |
| hutd family protein | VAR608DRAFT_RS00860 | Not Available | Positive | 182368 - 182943 | 20393.1 |
| imidazolonepropionase | VAR608DRAFT_RS00865 | Not Available | Positive | 182949 - 184199 | 43990.9 |
| formimidoylglutamate deiminase | VAR608DRAFT_RS00870 | Not Available | Positive | 184192 - 185586 | 49359.7 |
| n-formylglutamate deformylase | VAR608DRAFT_RS00875 | Not Available | Positive | 185591 - 186409 | 30159.8 |
| histidinol-phosphate transaminase | VAR608DRAFT_RS00880 | Not Available | Positive | 186433 - 187560 | 40336.8 |
| homocysteine s-methyltransferase family protein | VAR608DRAFT_RS00885 | Not Available | Positive | 187614 - 188660 | 37815.0 |
| sh3 domain-containing protein | VAR608DRAFT_RS00890 | Not Available | Positive | 188738 - 189544 | 28235.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
