Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. HW608 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1292882 bp
Thymine Count
1295452 bp
Guanine Count
2575522 bp
Cytosine Count
2569607 bp
Genome Length
7733665 bp
Protein-coding Genes
7296 genes
Non-Coding Genes
98 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAR608DRAFT_RS00800 | Not Available | Positive | 165192 - 165632 | 15641.1 |
| phosphoenolpyruvate carboxykinase (gtp) | VAR608DRAFT_RS00805 | Not Available | Negative | 165714 - 167561 | 67153.0 |
| hypothetical protein | VAR608DRAFT_RS37375 | Not Available | Negative | 167765 - 167917 | 5124.47 |
| threonine ammonia-lyase | VAR608DRAFT_RS00810 | Not Available | Negative | 168004 - 169203 | 42526.6 |
| atp-binding protein | VAR608DRAFT_RS00815 | Not Available | Positive | 169323 - 171644 | 86296.1 |
| s41 family peptidase | VAR608DRAFT_RS00820 | Not Available | Positive | 171703 - 173253 | 53230.0 |
| dna helicase recq | VAR608DRAFT_RS00825 | Not Available | Negative | 173250 - 175127 | 68525.9 |
| abc transporter substrate-binding protein | VAR608DRAFT_RS00830 | Not Available | Positive | 175502 - 176467 | 34089.2 |
| abc transporter permease | VAR608DRAFT_RS00835 | Not Available | Positive | 176500 - 177345 | 30011.4 |
| abc transporter atp-binding protein | VAR608DRAFT_RS00840 | Not Available | Positive | 177345 - 178124 | 29038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
